Protein Alignment C15 and hoxc9a

DIOPT Version :10

• Sequence 1: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Sequence 2: NP_571603.3
• Gene: hoxc9a / 58043
• ZFINID: ZDB-GENE-000328-5
• Length: 270
• Species: Danio rerio
• Alignment Length: 272
• Identity: 73/272 - (26%)
• Similarity: 103/272 - (37%)
• Gaps: 68/272 - (25%)

  Fly    52 ESETPLSESLQSEQTRSSSSENLP-------FSISRLLSKP--FETS-----------HHHHNNN 96
            |||..|:....:....||||...|       :.......||  |.||           :|.:.:.
Zfish    29 ESEDVLASRFTATGPISSSSRPTPLVPECADYPSCSFAPKPPVFTTSWAPVHSQSSVVYHPYTHQ 93

  Fly    97 NHLLSSS----------------PGSSSNNNNSGEKGEEKELLQQEDHDLAYKLATSIANSTYGS 145
            .||.:.|                ||.:.|:.:.|.|.:              ......|....||
Zfish    94 PHLGTDSRYVRSWLEPIPGTVSFPGYAGNSRHYGLKPD--------------TFQDPRAGDCLGS 144

  Fly   146 AAALYSYPHLYPSAAGGHVLRVPPQRTPL--TWALPPLHHAALAHQAVKDRLAAAFPIARRIGHP 208
            ....|: .:||.||..   :|...|.||.  |.:|     ::..|:..|..|....|:|..| |.
Zfish   145 NGRTYT-DYLYCSAVD---IREKQQNTPSPETESL-----SSGKHKDDKAELDPNNPVANWI-HA 199

  Fly   209 YQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWR 273
            ...|      |.|..:|:.|..||||.|....||....|..:||.|.:|:.|||.||||||.|.:
Zfish   200 RSTR------KKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMK 258

  Fly   274 RQTAEEREAERQ 285
            :...|:.:::.|
Zfish   259 KMNKEKNDSKEQ 270

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C15	NP_476873.2	COG5576	<196..315	CDD:227863	33/90 (37%)
		Homeodomain	218..274	CDD:459649	26/55 (47%)
hoxc9a	NP_571603.3	Hox9_act	11..189	CDD:461369	40/182 (22%)
		Homeodomain	203..251	CDD:459649	21/53 (40%)