Protein Alignment C15 and hoxb13a

DIOPT Version :10

• Sequence 1: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Sequence 2: NP_001038377.1
• Gene: hoxb13a / 559921
• ZFINID: ZDB-GENE-050812-1
• Length: 303
• Species: Danio rerio
• Alignment Length: 273
• Identity: 58/273 - (21%)
• Similarity: 107/273 - (39%)
• Gaps: 60/273 - (21%)

  Fly    38 SGSDVDMDGGSCYDESETPLSESLQSEQ--------TRSSSSENLPFSISRLLSKPFETSHHHHN 94
            ||....:..||.|...:...|.|.:|.:        .::||:..:|:..       |..|::...
Zfish    53 SGHPSSLVHGSSYPTVDVSTSSSAESGKQCTPCPTVPQASSTGPIPYGY-------FGNSYYPCR 110

  Fly    95 NNNHLLSSSPGSSSNNNNSGEKGEEKELLQQEDHDLAYK----LATSIANSTYGSAAALYSYPHL 155
            .....|.|....|:                     |:|.    :.|.:.:..|.:.|..:::.|.
Zfish   111 MGRGSLKSCTQPSA---------------------LSYTAEKYMDTPVTSEEYPTRAKEFAFYHS 154

  Fly   156 YPS--AAGGHVLRVPPQRT-----PLTWALPPLHHA---ALAH------QAVKDRLAAAF----P 200
            |||  .:....|.|...:|     |...:|.|:...   |||:      ...||:..|..    .
Zfish   155 YPSPYQSMASYLDVSVVQTLGTGEPRHDSLLPMDSYQPWALANGWGSQMYCSKDQGQAGHLWKSA 219

  Fly   201 IARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWF 265
            :|..:.|.:...:..:.:|.|..:|::|:.||||.:...|::...:|..::....:::.|:..||
Zfish   220 LADVVAHQHDGGSFRRGRKKRIPYTKVQLKELEKEYAANKFITKDKRRKISAVTNLSERQITIWF 284

  Fly   266 QNRRTKWRRQTAE 278
            ||||.|.::..|:
Zfish   285 QNRRVKEKKFIAK 297

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C15	NP_476873.2	COG5576	<196..315	CDD:227863	22/87 (25%)
		Homeodomain	218..274	CDD:459649	18/55 (33%)
hoxb13a	NP_001038377.1	HoxA13_N	27..145	CDD:463521	20/119 (17%)
		Homeodomain	237..293	CDD:459649	18/55 (33%)