Protein Alignment C15 and nkx3.3

DIOPT Version :10

• Sequence 1: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Sequence 2: NP_001013342.2
• Gene: nkx3.3 / 503746
• ZFINID: ZDB-GENE-050306-27
• Length: 240
• Species: Danio rerio
• Alignment Length: 328
• Identity: 74/328 - (22%)
• Similarity: 110/328 - (33%)
• Gaps: 135/328 - (41%)

  Fly    36 CGSGSDVD---------MDGGSCYDESETPLSESLQSEQTRSSSSENLPFSISRLLSKPFETSHH 91
            ||.....|         .|.|     |..|::...:|.|||.||..
Zfish    20 CGKNGSFDEEYEGEKRTQDSG-----SSVPVNRGAESAQTRISSCV------------------- 60

  Fly    92 HHNNNNHLLSSSPGSSSNNNNSGEKGEEKELLQQEDHDLAYKLATSIANSTYGSAAALYSYPHLY 156
                   |:..|..|..::......||:..|.::.||::
Zfish    61 -------LVLESLSSDQHSCEEESTGEDNSLERRHDHEM-------------------------- 92

  Fly   157 PSAAGGHVLRVPPQRTPLTWALPPLHHAALAHQAVKDRLAAAFPIARRIGHPYQNRTP-PKRKKP 220
                        .|:.|.:.:                               :::..| ..:|:.
Zfish    93 ------------DQQKPQSCS-------------------------------FEDSNPKSSKKRS 114

  Fly   221 RTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKW-RRQTAEERE--- 281
            |.:|:..||.|||:||:.|:||:..|||.||..||:|:.|||.||||||.|. |||.|.|..
Zfish   115 RAAFSHAQVYELERRFNLQRYLSGPERADLAGALKLTETQVKIWFQNRRYKTKRRQMAAELATTP 179

  Fly   282 ----AERQAANRLMLSLQAEAISKGFAPPSAPLGSQGGVNGAPL-------AALHGLQPWAEASH 335
                |:|.|...|:.:.|.:..::....||.|          ||       ..:...|||...:.
Zfish   180 TTTLAKRVAVKVLVRNDQRQYNTEDLPSPSVP----------PLYQSFPYYPYMFCFQPWISGNT 234

  Fly   336 AAG 338
            .:|
Zfish   235 LSG 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C15	NP_476873.2	COG5576	<196..315	CDD:227863	45/127 (35%)
		Homeodomain	218..274	CDD:459649	31/56 (55%)
nkx3.3	NP_001013342.2	Homeodomain	112..168	CDD:459649	31/55 (56%)