Protein Alignment C15 and Hoxb6

DIOPT Version :10

• Sequence 1: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Sequence 2: NP_001385781.1
• Gene: Hoxb6 / 497986
• RGDID: 1562142
• Length: 224
• Species: Rattus norvegicus
• Alignment Length: 177
• Identity: 51/177 - (28%)
• Similarity: 72/177 - (40%)
• Gaps: 39/177 - (22%)

  Fly   144 GSAAALYSYPHLYPSAAGGHVLRVPPQRTP---------LTWAL------PPLHHAALAHQAVKD 193
            |.||:.|     ||.|.||:....|....|         ...||      ||.|.........:|
  Rat    52 GFAASSY-----YPPAGGGYGRAAPCDYGPAPAFYREKDAACALSGADEPPPFHPEPRKSDCAQD 111

  Fly   194 R-----------LAAAFPIARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAER 247
            :           ....:|..:|:.....:...|..::.|.::||.|..||||.||..:||....|
  Rat   112 KSVFGETEEQKCSTPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRR 176

  Fly   248 AALARGLKMTDAQVKTWFQNRRTKWRR--------QTAEEREAERQA 286
            ..:|..|.:|:.|:|.||||||.||::        |.:.|.|.|:.|
  Rat   177 IEIAHALCLTERQIKIWFQNRRMKWKKESKLLSASQLSAEEEEEKPA 223

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C15	NP_476873.2	COG5576	<196..315	CDD:227863	34/99 (34%)
		Homeodomain	218..274	CDD:459649	26/55 (47%)
Hoxb6	NP_001385781.1	Homeodomain	147..203	CDD:459649	26/55 (47%)