DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and Hoxb7

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001017480.1 Gene:Hoxb7 / 497985 RGDID:1559918 Length:219 Species:Rattus norvegicus


Alignment Length:159 Identity:51/159 - (32%)
Similarity:73/159 - (45%) Gaps:26/159 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 SAAALYSYPH-LYPSAAGGHVLRVPPQRTPLTWALP--PLHHAALAHQAVKDRLAAA-FPIARRI 205
            |||.:|...: |.||:...|   ..|....|:...|  |...|....|...|..|.: |.|    
  Rat    69 SAAGVYEAGYGLEPSSFNMH---CAPFEQNLSGVCPGDPAKAAGAKEQRDSDLAAESNFRI---- 126

  Fly   206 GHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRT 270
             :|:...:..:||:.|.::||.|..||||.||..:||....|..:|..|.:|:.|:|.||||||.
  Rat   127 -YPWMRSSGTERKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRM 190

  Fly   271 KWRRQT--------------AEEREAERQ 285
            ||:::.              |:|.|.|.:
  Rat   191 KWKKENKTSGPGTTGQDKAEADEEEEEEE 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 36/105 (34%)
Homeodomain 218..274 CDD:459649 27/55 (49%)
Hoxb7NP_001017480.1 Antp-type hexapeptide 126..131 2/9 (22%)
Homeodomain 138..194 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..219 4/25 (16%)

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