Protein Alignment C15 and Tlx3

DIOPT Version :10

• Sequence 1: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Sequence 2: NP_001414519.1
• Gene: Tlx3 / 497881
• RGDID: 1564190
• Length: 291
• Species: Rattus norvegicus
• Alignment Length: 271
• Identity: 127/271 - (46%)
• Similarity: 147/271 - (54%)
• Gaps: 68/271 - (25%)

  Fly   121 ELLQQEDHDLAYKLATSIANSTYGSAAALY-----------SYPHLYPSAAG------------- 161
            ::|...|.|        .|.:..|...|.|           :||.|..|.||
  Rat    22 QILNSPDQD--------SAPAPRGPDGASYLGGPPGGRPGAAYPSLPASFAGLGAPFEDAGSYSV 78

  Fly   162 ------GHVLRVPPQRTPLTWALPPLHHAAL----------------------AHQAVKDRLAAA 198
                  ..|:|||..| ||..|:||...:||                      :.:.||||..||
  Rat    79 NLSLAPAGVIRVPAHR-PLPGAVPPPLPSALPAMPSVPTVSSLGGLNFPWMESSRRFVKDRFTAA 142

  Fly   199 -----FPIARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTD 258
                 |.:.||||||||||||||||||||||:|:|:.|||||||:|||||||||||||:.|||||
  Rat   143 AALTPFTVTRRIGHPYQNRTPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTD 207

  Fly   259 AQVKTWFQNRRTKWRRQTAEEREAERQAANRLMLSLQAEAISKGFAPPSAPLGSQGGVNGAPLAA 323
            |||||||||||||||||||||||||||.|:||||.||.:|..|.......|  ....::.:.|.|
  Rat   208 AQVKTWFQNRRTKWRRQTAEEREAERQQASRLMLQLQHDAFQKSLNDSIQP--DPLCLHNSSLFA 270

  Fly   324 LHGLQPWAEAS 334
            |..||||.|.|
  Rat   271 LQNLQPWEEDS 281

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C15	NP_476873.2	COG5576	<196..315	CDD:227863	89/123 (72%)
		Homeodomain	218..274	CDD:459649	48/55 (87%)
Tlx3	NP_001414519.1	None