DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and NPM1

DIOPT Version :9

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001341935.1 Gene:NPM1 / 4869 HGNCID:7910 Length:294 Species:Homo sapiens


Alignment Length:154 Identity:35/154 - (22%)
Similarity:55/154 - (35%) Gaps:39/154 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EDDHEHENEHGEEVEEQEIHVDVDSDSRMSCGSGS-----------DVDMDGGSCYDESETPLSE 59
            |:|.|.|:|..|:|:...|     |..|.:.|.||           |.|.|.....|:.|....:
Human   120 EEDAESEDEEEEDVKLLSI-----SGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDDDDD 179

  Fly    60 SLQSEQTRSSSSENLPFSISRLLSKPFETSHHHHNNNNHLLSSSPGSSSNNNNSGEKGEEKELLQ 124
            ....|:    :.|..|...| :...|.:.:...:.|..   .|.|.|:..:     ||:|....|
Human   180 DFDDEE----AEEKAPVKKS-IRDTPAKNAQKSNQNGK---DSKPSSTPRS-----KGQESFKKQ 231

  Fly   125 QED----------HDLAYKLATSI 138
            ::.          .|:..|:..||
Human   232 EKTPKTPKGPSSVEDIKAKMQASI 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863
Homeobox 220..273 CDD:278475
NPM1NP_001341935.1 Required for interaction with SENP3 1..186 19/74 (26%)
Necessary for interaction with APEX1. /evidence=ECO:0000269|PubMed:19188445 1..117
Nucleoplasmin 18..117 CDD:397268
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..247 31/144 (22%)
Nuclear localization signal. /evidence=ECO:0000255 152..157 0/4 (0%)
Nuclear localization signal. /evidence=ECO:0000255 191..197 2/6 (33%)
Required for nucleolar localization 243..294 4/13 (31%)
NPM1-C 245..291 CDD:406641 4/11 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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