DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and MSX2

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_002440.2 Gene:MSX2 / 4488 HGNCID:7392 Length:267 Species:Homo sapiens


Alignment Length:282 Identity:75/282 - (26%)
Similarity:109/282 - (38%) Gaps:93/282 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 SEQTRSSSSENLPFSISRLLS--KPFETSHHHHNNNNHLLSSSPGSSSNNNNSGEKGEEKELLQQ 125
            :|:.|...| :||||:..|:|  ||.:.:           |..|..|:                 
Human    35 AEERRVKVS-SLPFSVEALMSDKKPPKEA-----------SPLPAESA----------------- 70

  Fly   126 EDHDLAYKLATSIANSTYGSAAALYSYPHLYPSAAGGHVLRVPPQRTPLTWALPPLHHAALAHQA 190
                               ||.|.     |.|....||..|......||   :.|...|::..:.
Human    71 -------------------SAGAT-----LRPLLLSGHGAREAHSPGPL---VKPFETASVKSEN 108

  Fly   191 VKDRLAAAFPIARRIGHPYQNRTPPK--------------RKKPRTSFTRIQVAELEKRFHKQKY 241
            .:|  .||:     :..|.:...||:              .:||||.||..|:..||::|.:::|
Human   109 SED--GAAW-----MQEPGRYSPPPRHMSPTTCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQY 166

  Fly   242 LASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQAANRLMLS-----------LQ 295
            |:.||||..:..|.:|:.|||.||||||.|.:|....|.|..:.||..::.|           ||
Human   167 LSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPSSFSLPFPISSPLQ 231

  Fly   296 AEAI---SKGFAPPSAPLGSQG 314
            |.:|   |..|..|..|:...|
Human   232 AASIYGASYPFHRPVLPIPPVG 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 48/147 (33%)
Homeodomain 218..274 CDD:459649 28/55 (51%)
MSX2NP_002440.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..71 14/83 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..147 5/30 (17%)
Homeodomain 143..199 CDD:459649 28/55 (51%)

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