Protein Alignment C15 and nkx6.1

DIOPT Version :10

• Sequence 1: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Sequence 2: NP_001002475.1
• Gene: nkx6.1 / 436748
• ZFINID: ZDB-GENE-040718-178
• Length: 312
• Species: Danio rerio
• Alignment Length: 255
• Identity: 82/255 - (32%)
• Similarity: 113/255 - (44%)
• Gaps: 51/255 - (20%)

  Fly    52 ESETPLSESLQSEQTRSSSSENLPFSISRLLSKPFETSHHHHNNNNHLLSSSPGSSSNNNNSGEK 116
            |.:|||..:.....|..:||           :.|..||    .|...:..||||..:::..|. .
Zfish    30 EMKTPLYPAYPLSSTGPASS-----------TSPTATS----PNPGGIPVSSPGIKTSSGLSA-L 78

  Fly   117 GEEKELLQQEDHDLAYKLA-TSIANSTYGSAAALYSY--------PHLY--PSAAGGHVLRVP-- 168
            ...::......|.:...|: .|:|.|..|..:.|..:        |.||  ||||...|.|.|
Zfish    79 ASAQQCAIATPHGINDILSRPSVACSPAGILSGLPRFSSLSPPPPPGLYFSPSAAAVAVARYPKP 143

  Fly   169 ----PQRTPLTWALPPLHHAALAHQAVKDRLAAAFPIARRIGHPYQNRT----PPKRKKPRTSFT 225
                |.|||:.|  |.:..:.....|   |.|.:         |:||..    ..|||..|.:|:
Zfish   144 LTELPGRTPIFW--PGVMQSPHWRDA---RFACS---------PHQNSVLLDKDGKRKHTRPTFS 194

  Fly   226 RIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQ 285
            ..|:..|||.|.:.||||..|||.||..|.||::|||.||||||||||::.|.|..:.::
Zfish   195 GQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEMASAKK 254

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C15	NP_476873.2	COG5576	<196..315	CDD:227863	41/94 (44%)
		Homeodomain	218..274	CDD:459649	32/55 (58%)
nkx6.1	NP_001002475.1	Homeodomain	185..243	CDD:459649	34/57 (60%)