DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and bap

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster


Alignment Length:293 Identity:78/293 - (26%)
Similarity:121/293 - (41%) Gaps:64/293 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 SSSENLPFSISRLL--------------SKPFETSHHHHNNNNHLLSSSPGSSSNNNNSGEKGEE 119
            |.|...||||:.:|              |:|........::....:|.||.....:....:..:.
  Fly    17 SKSLTTPFSINDILTRSNPETRRMSSVDSEPEPEKLKPSSDRERSISKSPPLCCRDLGLYKLTQP 81

  Fly   120 KEL---LQQEDHDLAYKLATSIANS-------TYGSAAALYSYPHLYPSAAGGHVLRVPPQRTPL 174
            ||:   .:|..:.|.|..|....|:       |..|:||.|....|   |..|..|..|......
  Fly    82 KEIQPSARQPSNYLQYYAAAMDNNNHHHQATGTSNSSAADYMQRKL---AYFGSTLAAPLDMRRC 143

  Fly   175 TW------ALPPLHHAALAHQAVKDRLAAAFPIARRIGHPYQNRTPPKRKKPRTSFTRIQVAELE 233
            |.      :.|||               ::.|....:.|.....:  ::|:.|.:|:..||.|||
  Fly   144 TSNDSDCDSPPPL---------------SSSPSESPLSHDGSGLS--RKKRSRAAFSHAQVFELE 191

  Fly   234 KRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQAANRL--MLSLQA 296
            :||.:|:||:..||:.:|:.|::|:.|||.||||||.|.:|:..::.||....|::.  :..|..
  Fly   192 RRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAALLGASKRVPVQVLVR 256

  Fly   297 EAISKGFAPPSAPLGSQGGVNGAPLAALHGLQP 329
            |..|..:|..:||            .|.|||.|
  Fly   257 EDGSTTYAHMAAP------------GAGHGLDP 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 40/120 (33%)
Homeodomain 218..274 CDD:459649 28/55 (51%)
bapNP_732637.1 Homeodomain 176..232 CDD:459649 28/55 (51%)

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