Protein Alignment C15 and Ubx

DIOPT Version :10

• Sequence 1: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Sequence 2: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Alignment Length: 241
• Identity: 63/241 - (26%)
• Similarity: 91/241 - (37%)
• Gaps: 54/241 - (22%)

  Fly    97 NHLLSSSPGSSSNNNNSGEKGEEKELLQQEDHDLAYKLATSIANSTYGSAAALYSYPHLYPSAAG 161
            :|...|:.|:.|.:..:|..|..:..:.......|:.     ||.|...|||         ..|.
  Fly   177 SHRGGSAGGNVSVSGGNGNAGGVQSGVGVAGAGTAWN-----ANCTISGAAA---------QTAA 227

  Fly   162 GHVLRVPPQRTPLTWALPPLHHAALAHQA--------VKDRLAAAFPIARRIGHPYQNR------ 212
            ...|......|...|       .|:|.:.        ::..|.....|:..:|..|...
  Fly   228 ASSLHQASNHTFYPW-------MAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLL 285

  Fly   213 -----TPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKW 272
                 |...|::.|.::||.|..||||.||...||....|..:|..|.:|:.|:|.||||||.|.
  Fly   286 PDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKL 350

  Fly   273 RRQ---TAEEREAERQAANRLMLSLQAEAISKGFAPPSAPLGSQGG 315
            :::   ..|..|.|:||        ||:   |..|..:|....|||
  Fly   351 KKEIQAIKELNEQEKQA--------QAQ---KAAAAAAAAAAVQGG 385

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C15	NP_476873.2	COG5576	<196..315	CDD:227863	41/132 (31%)
		Homeodomain	218..274	CDD:459649	25/55 (45%)
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	25/55 (45%)