DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and Antp

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster


Alignment Length:154 Identity:44/154 - (28%)
Similarity:61/154 - (39%) Gaps:49/154 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 LYPSAAGGHVLRVPPQRTPLTWALPPLHHAALAHQAVKDRLAAAFPIARRIGHPYQNRTPP---- 215
            :|...:|...:..|||........||..|.                     |||.|: |||    
  Fly   230 MYQQQSGVPPVGAPPQGMMHQGQGPPQMHQ---------------------GHPGQH-TPPSQNP 272

  Fly   216 -----------------------KRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMT 257
                                   :||:.|.::||.|..||||.||..:||....|..:|..|.:|
  Fly   273 NSQSSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 337

  Fly   258 DAQVKTWFQNRRTKWRRQTAEERE 281
            :.|:|.||||||.||:::...:.|
  Fly   338 ERQIKIWFQNRRMKWKKENKTKGE 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 36/113 (32%)
Homeodomain 218..274 CDD:459649 27/55 (49%)
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 18/97 (19%)
Homeodomain 298..354 CDD:459649 27/55 (49%)

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