Protein Alignment C15 and Scr

DIOPT Version :10

• Sequence 1: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Sequence 2: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Alignment Length: 316
• Identity: 73/316 - (23%)
• Similarity: 112/316 - (35%)
• Gaps: 107/316 - (33%)

  Fly     5 EEDDHEH--------------ENEHGEEVEEQEIHVDVDSDSRMSCGSGSDVDMDGGS------- 48
            ::..|.|              :.:|.::.::|:       .:.:||...:|....|||
  Fly   129 QQQQHAHAAAAVAAQQQQQLAQQQHPQQQQQQQ-------QANISCKYANDPVTPGGSGGGGVSG 186

  Fly    49 -----CYDESETPLSESLQSEQ---TRSSSSENLPF----SISRLLSKPF------ETSHHHHNN 95
                 ....|....|:||.|.|   ||..|.:..|.    |::|.|:|..      ..:.....|
  Fly   187 SNNNNNSANSNNNNSQSLASPQDLSTRDISPKLSPSSVVESVARSLNKGVLGGSLAAAAAAAGLN 251

  Fly    96 NNHLLSSSPGSSSNNN------NSGEKGEEKELLQQEDHDLAYKLATSIANSTYGSAAALYSYPH 154
            |||..|...|...|.|      ..|:...|.:             :.:.|.|:..|.....:.|.
  Fly   252 NNHSGSGVSGGPGNVNVPMHSPGGGDSDSESD-------------SGNEAGSSQNSGNGKKNPPQ 303

  Fly   155 LYPSAAGGHVLRVPPQRTPLTWALPPLHHAALAHQAVKDRLAAAFPIARRIGHPYQNRTPPKRKK 219
            :||                  | :..:|                      :|....|.. .:.|:
  Fly   304 IYP------------------W-MKRVH----------------------LGTSTVNAN-GETKR 326

  Fly   220 PRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQ 275
            .|||:||.|..||||.||..:||....|..:|..|.:|:.|:|.||||||.||:::
  Fly   327 QRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 382

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C15	NP_476873.2	COG5576	<196..315	CDD:227863	31/80 (39%)
		Homeodomain	218..274	CDD:459649	29/55 (53%)
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	29/55 (53%)