Protein Alignment C15 and bcd

DIOPT Version :10

• Sequence 1: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Sequence 2: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Alignment Length: 219
• Identity: 59/219 - (26%)
• Similarity: 92/219 - (42%)
• Gaps: 57/219 - (26%)

  Fly   150 YSYPHLYPSAAGGH-VLRVPPQ-RTPLTWALPPLHHAALAHQAVKDRLAAAFP------------ 200
            :.:||.:|.....| .|::||| |.|.. .|......|:.:..::..|....|
  Fly    27 HPHPHSHPHPHHQHPQLQLPPQFRNPFD-LLFDERTGAINYNYIRPYLPNQMPKPDVFPSEELPD 90

  Fly   201 --IARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKT 263
              :.||          |:|  .||:||..|:||||:.|.:.:||.:...|.|:..|.:..||||.
  Fly    91 SLVMRR----------PRR--TRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKI 143

  Fly   264 WFQNRRTKWRRQTAEEREAERQAANRLMLSLQAEAISKGFA-----PPSAPLGSQGGVNGAPLAA 323
            ||:|||.:.:.|:.:.::.          |.:...:|.|..     |||....|.||  ||...|
  Fly   144 WFKNRRRRHKIQSDQHKDQ----------SYEGMPLSPGMKQSDGDPPSLQTLSLGG--GATPNA 196

  Fly   324 L-----------HGLQPWAEASHA 336
            |           |..:.::|:.:|
  Fly   197 LTPSPTPSTPTAHMTEHYSESFNA 220

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C15	NP_476873.2	COG5576	<196..315	CDD:227863	37/137 (27%)
		Homeodomain	218..274	CDD:459649	24/55 (44%)
bcd	NP_788587.1	Homeodomain	106..153	CDD:459649	20/46 (43%)