DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and CG34031

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster


Alignment Length:284 Identity:66/284 - (23%)
Similarity:103/284 - (36%) Gaps:110/284 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 HVDVDSDSRMSCGSGSDVDMDGGSCYDESETPLSESLQSEQTRSSSSENLPFSISRLLSKPFETS 89
            |::.|.....||                    :.:|:|:::.....:    |||..:||    ||
  Fly     4 HLEQDKSRLNSC--------------------IEKSIQTKKKGKLGA----FSIDSILS----TS 40

  Fly    90 HHHHNNNNHLLSSSPGSSSNNNNSG----------EKGEEKELLQQEDHDLAYKLATSIANSTYG 144
            ..|.:.|     |.|..::|..:|.          ::|..|..|...|                 
  Fly    41 EAHSSQN-----SLPKDNTNVTSSDISKLYAFSFTQEGNNKTPLTNFD----------------- 83

  Fly   145 SAAALYSYPHLYPSAAGGHVLRVPPQRTPLT----------WALPPLHHAALAHQAVKDRLAAAF 199
                          ...||     |:|.|:|          |                 |..:..
  Fly    84 --------------LCQGH-----PRRLPITFDGSTVSRFVW-----------------RTESIL 112

  Fly   200 PIARRIGHPYQNRTPPKR---KKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQV 261
            |.........|.:...||   :|||.:::..|:..||..|:..|||:.::|..|::.|.:|:.||
  Fly   113 PSYITNSTNLQEKQLRKRFTDRKPRQAYSASQLERLENEFNLDKYLSVSKRVELSKSLSLTEVQV 177

  Fly   262 KTWFQNRRTKWRRQ-TAEEREAER 284
            |||||||||||::| |:..:.|.|
  Fly   178 KTWFQNRRTKWKKQLTSRLKIAHR 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 35/93 (38%)
Homeodomain 218..274 CDD:459649 27/55 (49%)
CG34031NP_001246894.1 Homeodomain 134..190 CDD:459649 27/55 (49%)

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