DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and vax1

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_919391.2 Gene:vax1 / 373870 ZFINID:ZDB-GENE-030904-9 Length:317 Species:Danio rerio


Alignment Length:165 Identity:49/165 - (29%)
Similarity:67/165 - (40%) Gaps:57/165 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 KKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEERE- 281
            |:.|||||..|:..||..|.:.:|:...||..|||.|.:::.|||.||||||||.::...::.| 
Zfish    93 KRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQGKDSEL 157

  Fly   282 ----AERQAA---------NRLML-----------------------------------SLQAEA 298
                :|..|.         .||:.                                   |..:.|
Zfish   158 RSVVSETAATCSVLRLLEQGRLLTPPGLPGLLPHCGSSSLGSALRGPSLGITANGGSSSSSSSSA 222

  Fly   299 ISKGFAPPSAPL------GSQGGVNGAPLAALHGL 327
            .|.|.|..|.||      |:..|:.|:|.|  |||
Zfish   223 GSSGTAGGSPPLPTVTSSGTVTGLQGSPPA--HGL 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 42/151 (28%)
Homeodomain 218..274 CDD:459649 28/55 (51%)
vax1NP_919391.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..62
Homeodomain 93..149 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..248 10/44 (23%)
Blue background indicates that the domain is not in the aligned region.

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