Protein Alignment C15 and lms

DIOPT Version :10

• Sequence 1: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Sequence 2: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Alignment Length: 140
• Identity: 45/140 - (32%)
• Similarity: 71/140 - (50%)
• Gaps: 26/140 - (18%)

  Fly   216 KRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEER 280
            ::|:|||:|:..|:..||..|.:.|||:.|:|.|||:.|::|:.|:|.|||||||||:|:...:.
  Fly    85 RKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRKYTSDV 149

  Fly   281 EA----------------ERQAANRLMLSLQA-------EAISKGFAPPSAPLGSQGGVNGAPL- 321
            |.                .....:||.|..|.       ::|....:..:||:.|.....|:|:
  Fly   150 ETLASHYYAQLGIGGLARPMVVGDRLWLFSQTPTGPTPIQSIMLNGSGSAAPMASATTATGSPMR 214

  Fly   322 --AALHGLQP 329
              |...|:.|
  Fly   215 PYATSGGMPP 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C15	NP_476873.2	COG5576	<196..315	CDD:227863	40/121 (33%)
		Homeodomain	218..274	CDD:459649	30/55 (55%)
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	8/20 (40%)
		Homeodomain	87..143	CDD:459649	30/55 (55%)