Protein Alignment C15 and Hoxd12

DIOPT Version :10

• Sequence 1: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Sequence 2: NP_001178832.1
• Gene: Hoxd12 / 366082
• RGDID: 1309797
• Length: 268
• Species: Rattus norvegicus
• Alignment Length: 75
• Identity: 28/75 - (37%)
• Similarity: 43/75 - (57%)
• Gaps: 1/75 - (1%)

  Fly   206 GHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRT 270
            |.|: ...|.:.:|.|..:|:.|:||||..|...:::...:|..|:..|.::|.|||.||||||.
  Rat   190 GLPW-GAAPGRARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRM 253

  Fly   271 KWRRQTAEER 280
            |.:|....|:
  Rat   254 KKKRVVQREQ 263

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C15	NP_476873.2	COG5576	<196..315	CDD:227863	28/75 (37%)
		Homeodomain	218..274	CDD:459649	23/55 (42%)
Hoxd12	NP_001178832.1	Homeodomain	201..257	CDD:459649	23/55 (42%)