Protein Alignment C15 and Barx1

DIOPT Version :10

• Sequence 1: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Sequence 2: NP_001102350.1
• Gene: Barx1 / 364680
• RGDID: 1310884
• Length: 254
• Species: Rattus norvegicus
• Alignment Length: 229
• Identity: 61/229 - (26%)
• Similarity: 93/229 - (40%)
• Gaps: 72/229 - (31%)

  Fly    53 SETPLSESLQSEQTRSSSSENLPFSISRLL-SKPFETSHHHHNNNNHLLSSSPGSSSNNNNSGEK 116
            :|.|..:........:::.|.|.|.:..|| ::||         ::||
  Rat    36 TEPPGPKGAAPAAAAAAAGELLKFGVQALLAARPF---------HSHL----------------- 74

  Fly   117 GEEKELLQQEDHDLAYKLATSIANSTYGSAAALYSYPHLYP---SAAGGHVLRVPPQRTPLTWAL 178
                .:|:.|.                   ||::.:| |.|   |..|..:|...|       .:
  Rat    75 ----AVLKAEQ-------------------AAVFKFP-LAPLGCSGLGSALLAAGP-------GM 108

  Fly   179 P---PLHHAALAHQAVKDRLAAAFPIARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQK 240
            |   ...|..|..| ::.:|.||       |.........|.::.||.||.:|:..|||||.|||
  Rat   109 PGTAGTSHLPLELQ-LRGKLEAA-------GSGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQK 165

  Fly   241 YLASAERAALARGLKMTDAQVKTWFQNRRTKWRR 274
            ||::.:|..||..|.::..|||||:||||.||::
  Rat   166 YLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKK 199

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C15	NP_476873.2	COG5576	<196..315	CDD:227863	34/79 (43%)
		Homeodomain	218..274	CDD:459649	30/55 (55%)
Barx1	NP_001102350.1	Homeodomain	143..199	CDD:459649	30/55 (55%)