DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and H2.0

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster


Alignment Length:424 Identity:102/424 - (24%)
Similarity:145/424 - (34%) Gaps:142/424 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSHEEDDHEHENEH--GE-EVE------EQEIHVDVDSDSRMSCGSGSDVDMDGGSCYDESETPL 57
            :|.|:...|:.:.|  || ||.      ...::||.:..::.||.|.:.|          |.:|.
  Fly     8 ASMEQSMPENLSTHMYGECEVNPTLAKCPDPVNVDHELPTKESCASTTIV----------STSPT 62

  Fly    58 SESLQSEQTRSSSSENLPFSISRLLSKPFETSHHHHNNNNHLLSSSPGS-----------SSNNN 111
            |.:       |::...|.||:.|||....|.||...:::....|...||           |..|.
  Fly    63 SAT-------STTKVKLSFSVDRLLGSEPEESHRQSSSSPSTKSCCDGSILACCSFPHCFSQANA 120

  Fly   112 NSGEKGEEKELLQQEDHDLAYKLATSIANSTYGSAA--ALYSYPHL------------------- 155
            .|...|          |.......|..::.||....  .|:..|::                   
  Fly   121 ESRRFG----------HATLPPTFTPTSSHTYPFVGLDKLFPGPYMDYKSVLRPTPIRAAEHAAP 175

  Fly   156 -YPSAAGGHVLRV---------------------------PPQR-TPLTWALPPLHHAA---LAH 188
             ||:.|...:||.                           ||.. |..:..|.|||...   |..
  Fly   176 TYPTLATNALLRFHQHQKQQHQQHHHHQHHPKHLHQQHKPPPHNSTTASALLAPLHSLTSLQLTQ 240

  Fly   189 Q---------------AVKDRLAAAFPIARRIGHPY-----------QNRTPPKRKKPRTSFTRI 227
            |               |.....|||...::...|.:           .:....||...|..|:.:
  Fly   241 QQQRFLGKTPQQLLDIAPTSPAAAAAATSQNGAHGHGGGNGQGNASAGSNGKRKRSWSRAVFSNL 305

  Fly   228 QVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQAANRLML 292
            |...||.:|.:|||:...:|..||..|.:||||||.||||||.|| |.|.|..::.::.      
  Fly   306 QRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKW-RHTRENLKSGQEK------ 363

  Fly   293 SLQAEAI--SKGFAPPSAPLGSQGGVNGAPLAAL 324
              |..|:  |.|....|.|.|     :|.|..||
  Fly   364 --QPSAVPESGGVFKTSTPSG-----DGTPQEAL 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 43/131 (33%)
Homeodomain 218..274 CDD:459649 27/55 (49%)
H2.0NP_523488.2 Homeodomain 292..352 CDD:459649 29/60 (48%)

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