DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and H2.0

DIOPT Version :9

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster


Alignment Length:424 Identity:102/424 - (24%)
Similarity:145/424 - (34%) Gaps:142/424 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSHEEDDHEHENEH--GE-EVE------EQEIHVDVDSDSRMSCGSGSDVDMDGGSCYDESETPL 57
            :|.|:...|:.:.|  || ||.      ...::||.:..::.||.|.:.|          |.:|.
  Fly     8 ASMEQSMPENLSTHMYGECEVNPTLAKCPDPVNVDHELPTKESCASTTIV----------STSPT 62

  Fly    58 SESLQSEQTRSSSSENLPFSISRLLSKPFETSHHHHNNNNHLLSSSPGS-----------SSNNN 111
            |.:       |::...|.||:.|||....|.||...:::....|...||           |..|.
  Fly    63 SAT-------STTKVKLSFSVDRLLGSEPEESHRQSSSSPSTKSCCDGSILACCSFPHCFSQANA 120

  Fly   112 NSGEKGEEKELLQQEDHDLAYKLATSIANSTYGSAA--ALYSYPHL------------------- 155
            .|...|          |.......|..::.||....  .|:..|::                   
  Fly   121 ESRRFG----------HATLPPTFTPTSSHTYPFVGLDKLFPGPYMDYKSVLRPTPIRAAEHAAP 175

  Fly   156 -YPSAAGGHVLRV---------------------------PPQR-TPLTWALPPLHHAA---LAH 188
             ||:.|...:||.                           ||.. |..:..|.|||...   |..
  Fly   176 TYPTLATNALLRFHQHQKQQHQQHHHHQHHPKHLHQQHKPPPHNSTTASALLAPLHSLTSLQLTQ 240

  Fly   189 Q---------------AVKDRLAAAFPIARRIGHPY-----------QNRTPPKRKKPRTSFTRI 227
            |               |.....|||...::...|.:           .:....||...|..|:.:
  Fly   241 QQQRFLGKTPQQLLDIAPTSPAAAAAATSQNGAHGHGGGNGQGNASAGSNGKRKRSWSRAVFSNL 305

  Fly   228 QVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQAANRLML 292
            |...||.:|.:|||:...:|..||..|.:||||||.||||||.|| |.|.|..::.::.      
  Fly   306 QRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKW-RHTRENLKSGQEK------ 363

  Fly   293 SLQAEAI--SKGFAPPSAPLGSQGGVNGAPLAAL 324
              |..|:  |.|....|.|.|     :|.|..||
  Fly   364 --QPSAVPESGGVFKTSTPSG-----DGTPQEAL 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 43/131 (33%)
Homeobox 220..273 CDD:278475 26/52 (50%)
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 27/53 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 1 0.900 - - E1_KOG0488
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

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