DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and B-H1

DIOPT Version :9

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster


Alignment Length:433 Identity:109/433 - (25%)
Similarity:155/433 - (35%) Gaps:158/433 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSHEEDDHEHENEHGEEVEEQEIHVDVDSDSRMSCGSGSDVDMDGGSCYDESETPLSESLQSEQ 65
            :|:.::..|:|...:|  ::...:...:.|.:.||.|.              |.|..|...:..:
  Fly    26 LSTLQQQHHQHHLHYG--LQPPAVAHSIHSTTTMSSGG--------------STTTASGIGKPNR 74

  Fly    66 TRSSSSENLPFSISRLLSKPFETSH----HHHNNNNHLLS---SSPGSSSNNNN-SGEKGEEKEL 122
            :|...::.|..|.:....|  :..|    |||||||:..|   |||..|:|||| :|:..|    
  Fly    75 SRFMINDILAGSAAAAFYK--QQQHHQQLHHHNNNNNSGSSGGSSPAHSNNNNNINGDNCE---- 133

  Fly   123 LQQEDHDLAYKLATSIANSTYGSAAALY------SYPHLYPSA--------------AGGHVLRV 167
                        |:::|......:|..:      ::||.:|.|              |||:.|.|
  Fly   134 ------------ASNVAGVGVLPSALHHPQPHPPTHPHTHPHALMHPHGKLGHFPPTAGGNGLNV 186

  Fly   168 PPQRTPLTWALPPLHHAALAHQAVKDRLAAAFPIARRIGHPYQNRTPP----------------- 215
            ....     |....|:||.|..|.....|||...|...........||                 
  Fly   187 AQYA-----AAMQQHYAAAAAAAAARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGLAPPAGG 246

  Fly   216 ---------------------------------------------------KRKKPRTSFTRIQV 229
                                                               |::|.||:||..|:
  Fly   247 DLDDSSDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGSTSDMSGLSKKQRKARTAFTDHQL 311

  Fly   230 AELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQAANRLMLSL 294
            ..|||.|.:||||:..||..||..|.::|.|||||:|||||||:||||...|...:|.|      
  Fly   312 QTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGN------ 370

  Fly   295 QAEAISKGFAPPSAPLGSQGGVNGAPLAALHGLQPWAEASHAA 337
                    ||      ..|....|:|..   |..|:|.|:.||
  Fly   371 --------FA------AFQRLYGGSPYL---GAWPYAAAAGAA 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 49/186 (26%)
Homeobox 220..273 CDD:278475 30/52 (58%)
B-H1NP_523387.1 Homeobox 303..355 CDD:278475 30/51 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 1 0.900 - - E1_KOG0488
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

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