DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and HOXD12

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_067016.3 Gene:HOXD12 / 3238 HGNCID:5135 Length:270 Species:Homo sapiens


Alignment Length:157 Identity:47/157 - (29%)
Similarity:69/157 - (43%) Gaps:26/157 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 TSIANSTYGSAAALYSYPHLYPSAAGGHVLRVPPQRTPLTWALP-----------PLH-HAALAH 188
            :|:|.:.....||.|.|       ||  |.|..|..|.|....|           ||: :..:..
Human   123 SSLAPAVAALKAAKYDY-------AG--VGRATPGSTTLLQGAPCAPGFKDDTKGPLNLNMTVQA 178

  Fly   189 QAVKDRLAAAFPIARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARG 253
            ..|...|..:.|    .|.|: ...|.:.:|.|..:|:.|:||||..|...:::...:|..|:..
Human   179 AGVASCLRPSLP----DGLPW-GAAPGRARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNR 238

  Fly   254 LKMTDAQVKTWFQNRRTKWRRQTAEER 280
            |.::|.|||.||||||.|.:|....|:
Human   239 LNLSDQQVKIWFQNRRMKKKRVVLREQ 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 29/85 (34%)
Homeodomain 218..274 CDD:459649 23/55 (42%)
HOXD12NP_067016.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 102..122
Homeodomain 203..259 CDD:459649 23/55 (42%)
Blue background indicates that the domain is not in the aligned region.

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