DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and HOXD9

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_055028.3 Gene:HOXD9 / 3235 HGNCID:5140 Length:352 Species:Homo sapiens


Alignment Length:236 Identity:57/236 - (24%)
Similarity:82/236 - (34%) Gaps:71/236 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 TPLSESLQSEQTRSSSSENLPFSISRLLSKPFETSHHHHNNNNHLLSSSPGSSSNNNNSGEKGEE 119
            |..|.:..|..:.||||:....|::|                     .|.||      ||.:...
Human   172 TAASTTSSSSTSLSSSSKRTECSVAR---------------------ESQGS------SGPEFSC 209

  Fly   120 KELLQQEDHDLAYKLATSIANSTYGSAAALYSYPHLYPSAAGGHVLRVPPQRTPLTWALPPLHHA 184
            ...||::     ...||.......|..||..:.....|||...|                |:...
Human   210 NSFLQEK-----AAAATGGTGPGAGIGAATGTGGSSEPSACSDH----------------PIPGC 253

  Fly   185 ALAHQAVKDRLAAAFPIARRIGHPYQNRTPPKR-----------KKPRTSFTRIQVAELEKRFHK 238
            :|..:            .::...|.|.:..|..           :|.|..:|:.|..||||.|..
Human   254 SLKEE------------EKQHSQPQQQQLDPNNPAANWIHARSTRKKRCPYTKYQTLELEKEFLF 306

  Fly   239 QKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEE 279
            ..||....|..:||.|.:|:.|||.||||||.|.::.:.|:
Human   307 NMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMSKEK 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 30/95 (32%)
Homeodomain 218..274 CDD:459649 26/55 (47%)
HOXD9NP_055028.3 Hox9_act 11..>164 CDD:461369
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 126..208 14/62 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 229..276 12/74 (16%)
Homeodomain 286..337 CDD:459649 23/50 (46%)
Blue background indicates that the domain is not in the aligned region.

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