DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment C15 and HOXD3

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_008829.3 Gene:HOXD3 / 3232 HGNCID:5137 Length:432 Species:Homo sapiens


Alignment Length:313 Identity:65/313 - (20%)
Similarity:102/313 - (32%) Gaps:120/313 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SCGSGSDVDMDGGSCYDESETPLSESLQSEQTRSSSSENLPFSISRLLSKPFETSHHHHNNNNHL 99
            :..|..|.|..|.:|..:|..||       :..:.....|..|..|                   
Human    54 AAASSLDTDYPGSACSIQSSAPL-------RAPAHKGAELNGSCMR------------------- 92

  Fly   100 LSSSPGSSSNNNNSGEKGEEKELLQQEDHDLAYKLATSIANSTYGSAAALYSYPHLYPSAAGGHV 164
                ||  :.|:..|..|.:...|..|..                                    
Human    93 ----PG--TGNSQGGGGGSQPPGLNSEQQ------------------------------------ 115

  Fly   165 LRVPPQRTPLTWALPPLH-----------------HAALAHQAVKDRLAAAFPIARR-------- 204
               |||..|....|||..                 :|:.:...:..::   ||..:.        
Human   116 ---PPQPPPPPPTLPPSSPTNPGGGVPAKKPKGGPNASSSSATISKQI---FPWMKESRQNSKQK 174

  Fly   205 -----IGHPYQNRTP--PKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVK 262
                 .|...::::|  |..|:.||::|..|:.||||.||..:||....|..:|..|.:|:.|:|
Human   175 NSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIK 239

  Fly   263 TWFQNRRTKWRRQTAEEREAERQAANRLMLSLQAEAISKGFAPPSAPLGSQGG 315
            .||||||.|:::.         |.|..::.|..:::..:     |.|||...|
Human   240 IWFQNRRMKYKKD---------QKAKGILHSPASQSPER-----SPPLGGAAG 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 38/133 (29%)
Homeodomain 218..274 CDD:459649 26/55 (47%)
HOXD3NP_008829.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..62 2/7 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..197 28/202 (14%)
Antp-type hexapeptide 160..165 2/7 (29%)
Homeodomain 195..251 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..280 8/31 (26%)
DUF4074 369..430 CDD:463833
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..432
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.