DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and HOXC13

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_059106.2 Gene:HOXC13 / 3229 HGNCID:5125 Length:330 Species:Homo sapiens


Alignment Length:247 Identity:58/247 - (23%)
Similarity:98/247 - (39%) Gaps:70/247 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 SSSSENLPFSISRLLSKPFETSHH----HHNNNNHLLSSSPGSSSNNNNSGEKGEEKELLQQEDH 128
            :|||..|.:..      ||..|::    .||.|   |...|.:    .:.|:|..|.        
Human   113 TSSSATLGYGY------PFGGSYYGCRLSHNVN---LQQKPCA----YHPGDKYPEP-------- 156

  Fly   129 DLAYKLATSIANSTYGSAAALYSYPHLYPSAAGGH--------VLRVP-----PQRTPLTWALPP 180
                  :.::......|.|..:::   |||.|..:        |..||     |:  |...||.|
Human   157 ------SGALPGDDLSSRAKEFAF---YPSFASSYQAMPGYLDVSVVPGISGHPE--PRHDALIP 210

  Fly   181 L---HHAALAH------QAVKDRLAAA------FPIARRIGHPYQNRTPPKR--KKPRTSFTRIQ 228
            :   .|.||::      ...|::..:|      ||..    .|.|......|  :|.|..:|::|
Human   211 VEGYQHWALSNGWDSQVYCSKEQSQSAHLWKSPFPDV----VPLQPEVSSYRRGRKKRVPYTKVQ 271

  Fly   229 VAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEER 280
            :.||||.:...|::...:|..::....:::.||..||||||.|.::..::.:
Human   272 LKELEKEYAASKFITKEKRRRISATTNLSERQVTIWFQNRRVKEKKVVSKSK 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 25/93 (27%)
Homeodomain 218..274 CDD:459649 19/55 (35%)
HOXC13NP_059106.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..50
HoxA13_N 54..168 CDD:463521 15/81 (19%)
Homeodomain 261..312 CDD:459649 16/50 (32%)
Blue background indicates that the domain is not in the aligned region.

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