DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment C15 and HOXC10

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_059105.2 Gene:HOXC10 / 3226 HGNCID:5122 Length:342 Species:Homo sapiens


Alignment Length:214 Identity:56/214 - (26%)
Similarity:78/214 - (36%) Gaps:76/214 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 GSAAALYSYPHLYPSAAGGHVLRVPP--QRTPLTWALPPLHHAALAH--QAVKDRLAAAFPIARR 204
            |..|||||:| |..|..|.|.:.||.  :.:|...||....|.:.|:  :|..::.|:..|.|..
Human   123 GPEAALYSHP-LPESCLGEHEVPVPSYYRASPSYSALDKTPHCSGANDFEAPFEQRASLNPRAEH 186

  Fly   205 IGHPY-------------QNRTP-------------PK--------------------------- 216
            :..|.             .::||             ||                           
Human   187 LESPQLGGKVSFPETPKSDSQTPSPNEIKTEQSLAGPKGSPSESEKERAKAADSSPDTSDNEAKE 251

  Fly   217 -----------------RKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTW 264
                             ||| |..:|:.|..||||.|....||....|..:::.:.:||.|||.|
Human   252 EIKAENTTGNWLTAKSGRKK-RCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIW 315

  Fly   265 FQNRRTKWRRQTAEEREAE 283
            |||||.|.::...|.|..|
Human   316 FQNRRMKLKKMNRENRIRE 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 37/158 (23%)
Homeodomain 218..274 CDD:459649 25/55 (45%)
HOXC10NP_059105.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 187..271 6/83 (7%)
Homeodomain 269..325 CDD:459649 26/56 (46%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.