DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and HOXC8

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_073149.1 Gene:HOXC8 / 3224 HGNCID:5129 Length:242 Species:Homo sapiens


Alignment Length:242 Identity:57/242 - (23%)
Similarity:85/242 - (35%) Gaps:84/242 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 NHLLSSSPGSSSNNNNSGEKGEEKELLQQEDH---DLAYKLATSIANSTY----------GSAAA 148
            :|.|...||.|:..            .|...|   |..:...:.|:||.|          |.|:.
Human    35 SHALVYGPGGSAPG------------FQHASHHVQDFFHHGTSGISNSGYQQNPCSLSCHGDASK 87

  Fly   149 LYSY-----PHLYPSAAGGHVLRVPPQRTPLTWALPPLHHAALAHQAVKDRLAAAFPIARRIGHP 208
            .|.|     ..||.:.....|::.|..::                       :|....:...||.
Human    88 FYGYEALPRQSLYGAQQEASVVQYPDCKS-----------------------SANTNSSEGQGHL 129

  Fly   209 YQNRTP-----------PKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVK 262
            .||.:|           |.|:..|.:::|.|..||||.|....||....|..::..|.:|:.|||
Human   130 NQNSSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVK 194

  Fly   263 TWFQNRRTKWRRQT--------------------AEEREAERQAANR 289
            .||||||.||:::.                    .||:|.|.:..|:
Human   195 IWFQNRRMKWKKENNKDKLPGARDEEKVEEEGNEEEEKEEEEKEENK 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 37/125 (30%)
Homeodomain 218..274 CDD:459649 24/55 (44%)
HOXC8NP_073149.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..154 8/62 (13%)
Antp-type hexapeptide 138..143 0/4 (0%)
Homeodomain 150..206 CDD:459649 24/55 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 206..242 5/36 (14%)

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