DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and HOXA9

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_689952.1 Gene:HOXA9 / 3205 HGNCID:5109 Length:272 Species:Homo sapiens


Alignment Length:261 Identity:61/261 - (23%)
Similarity:90/261 - (34%) Gaps:80/261 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 SLQSEQTRSSSSENLPFSISRLLSKPFETSHHHHNN------------------NNHLLSSSPG- 105
            |.||:.|...:|.| |...:...:.|....||||::                  ....|..:|| 
Human    55 SFQSKATVFGASWN-PVHAAGANAVPAAVYHHHHHHPYVHPQAPVAAAAPDGRYMRSWLEPTPGA 118

  Fly   106 -SSSNNNNSGEKGEEKELLQQ--------EDHDLAYKLATSIANSTYGS---------AAALYSY 152
             |.:...:|...|.:.|.|..        :.|.|      |:.:...||         :...:|.
Human   119 LSFAGLPSSRPYGIKPEPLSARRGDCPTLDTHTL------SLTDYACGSPPVDREKQPSEGAFSE 177

  Fly   153 PHLYPSAAGGHVLRVPPQRTPLTWALPPLHHAALAHQAVKDRLAAAFPIARRIGHPYQNRTPPKR 217
            .:. .:.:||....:.|......|    ||                   ||            ..
Human   178 NNA-ENESGGDKPPIDPNNPAANW----LH-------------------AR------------ST 206

  Fly   218 KKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREA 282
            :|.|..:|:.|..||||.|....||....|..:||.|.:|:.|||.||||||.|.::...:..:.
Human   207 RKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDRAKD 271

  Fly   283 E 283
            |
Human   272 E 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 29/88 (33%)
Homeodomain 218..274 CDD:459649 26/55 (47%)
HOXA9NP_689952.1 Hox9_act 1..193 CDD:461369 28/145 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..198 6/43 (14%)
Homeodomain 207..263 CDD:459649 26/55 (47%)

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