DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and HOXA6

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_076919.1 Gene:HOXA6 / 3203 HGNCID:5107 Length:233 Species:Homo sapiens


Alignment Length:183 Identity:55/183 - (30%)
Similarity:81/183 - (44%) Gaps:50/183 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 LATSIANSTYGSAAALYSYPHL---YPSAAGGHVLRVPPQRTPLTWALPPLHHA----------- 184
            ||.:.|:..|| |:..||...|   .||.:|       .||.|..:    ||.:           
Human    65 LACNRASYEYG-ASCFYSDKDLSGASPSGSG-------KQRGPGDY----LHFSPEQQYKPDSSS 117

  Fly   185 ----ALAHQAVKDR--LAAAFPIARRI----GHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQ 239
                || |....||  .:..:|..:|:    |..|.:.    .::.|.::||.|..||||.||..
Human   118 GQGKAL-HDEGADRKYTSPVYPWMQRMNSCAGAVYGSH----GRRGRQTYTRYQTLELEKEFHFN 177

  Fly   240 KYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQ---------TAEEREAE 283
            :||....|..:|..|.:|:.|:|.||||||.||:::         :.|:.||:
Human   178 RYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGEDSEAK 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 33/101 (33%)
Homeodomain 218..274 CDD:459649 26/55 (47%)
HOXA6NP_076919.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..127 11/49 (22%)
Antp-type hexapeptide 136..141 1/4 (25%)
Homeodomain 156..212 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..233 3/17 (18%)

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