DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and HOXA4

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_002132.3 Gene:HOXA4 / 3201 HGNCID:5105 Length:320 Species:Homo sapiens


Alignment Length:291 Identity:77/291 - (26%)
Similarity:108/291 - (37%) Gaps:84/291 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 PFETSHHHHNNNNHLLSSSPGSSSNNNNSGEKGEEKELLQQ---------EDHDLAYKLATSIAN 140
            |||....|..:..  ....||.............:...|||         .:...:|....:...
Human    19 PFEEYAQHSGSGG--ADGGPGGGPGYQQPPAPPTQHLPLQQPQLPHAGGGREPTASYYAPRTARE 81

  Fly   141 STYGSAAALY--------SYPHLY---------------PSAAGG--------HVLR-------- 166
            ..| .|||||        :||:.|               |:.|.|        |||:        
Human    82 PAY-PAAALYPAHGAADTAYPYGYRGGASPGRPPQPEQPPAQAKGPAHGLHASHVLQPQLPPPLQ 145

  Fly   167 ---VPP------QRTPLTWALP--------PLHHAALAHQAVKDRLAAAFPIARRIG----HPYQ 210
               |||      :..|.|..:|        ||..|..:...:|.:....:|..::|.    :|..
Human   146 PRAVPPAAPRRCEAAPATPGVPAGGSAPACPLLLADKSPLGLKGKEPVVYPWMKKIHVSAVNPSY 210

  Fly   211 NRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQ 275
            |...|||.  ||::||.||.||||.||..:||....|..:|..|.:::.|||.||||||.||:: 
Human   211 NGGEPKRS--RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK- 272

  Fly   276 TAEEREAERQAANRLMLSLQAEAISKGFAPP 306
                   :.:..|..|.|..:.:.|.|  ||
Human   273 -------DHKLPNTKMRSSNSASASAG--PP 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 42/115 (37%)
Homeodomain 218..274 CDD:459649 28/55 (51%)
HOXA4NP_002132.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..77 10/59 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 101..168 13/66 (20%)
Antp-type hexapeptide 194..199 1/4 (25%)
Homeodomain 216..272 CDD:459649 30/57 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 273..320 7/24 (29%)

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