Protein Alignment C15 and pdx1

DIOPT Version :10

• Sequence 1: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Sequence 2: NP_571518.2
• Gene: pdx1 / 30721
• ZFINID: ZDB-GENE-990415-122
• Length: 246
• Species: Danio rerio
• Alignment Length: 253
• Identity: 67/253 - (26%)
• Similarity: 103/253 - (40%)
• Gaps: 57/253 - (22%)

  Fly    92 HHNNNNHLLSSSPGSSSNNNNSGEKGEEKELLQQEDHDLAYKLATSIANSTYGSAAALYSYPHL- 155
            |:...|||...|.....:.|....:.....|..::.|            |.|.|.......|:|
Zfish     6 HYYPPNHLYKDSCAFQRHPNEDYSQNPPPCLYMRQAH------------SVYASPLGAQDQPNLT 58

  Fly   156 ---------YPSAAGGHVLRVPPQRTPLTWALPPL--HHAALAHQAVKDRLAAAFP---IARRIG 206
                     ....||.| |.:|  :|..| :|..|  :..:|.....::|....||   ..:...
Zfish    59 DITSYNMSSRDDLAGPH-LHLP--QTSQT-SLQSLGGYGDSLDLCGDRNRYHLPFPWMKSTKSHT 119

  Fly   207 HPYQNR-TPP------KRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTW 264
            |.::.: |.|      :.|:.||::||.|:.||||.|...||::...|..||..|.:|:..:|.|
Zfish   120 HAWKGQWTGPYMVEAEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELALTLSLTERHIKIW 184

  Fly   265 FQNRRTKWRRQTAEEREAERQAANRLMLSLQAEAISKG------------FAPPSAPL 310
            |||||.||:::     |.:|:|  |.:...|..:|:.|            .|.|.:||
Zfish   185 FQNRRMKWKKE-----EDKRRA--RGVDPEQDSSITSGDLKDESCVGTATLAGPPSPL 235

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C15	NP_476873.2	COG5576	<196..315	CDD:227863	43/137 (31%)
		Homeodomain	218..274	CDD:459649	27/55 (49%)
pdx1	NP_571518.2	Homeodomain	138..194	CDD:459649	27/55 (49%)