DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and nkx2.5

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_571496.2 Gene:nkx2.5 / 30696 ZFINID:ZDB-GENE-980526-321 Length:314 Species:Danio rerio


Alignment Length:98 Identity:45/98 - (45%)
Similarity:56/98 - (57%) Gaps:20/98 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 KRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEER 280
            ||:|||..|::.||.|||:||.:||||::.||..||..||:|..|||.||||||.|.:||     
Zfish   140 KRRKPRVLFSQAQVYELERRFKQQKYLSAPERDHLANVLKLTSTQVKIWFQNRRYKCKRQ----- 199

  Fly   281 EAERQAANRLMLSLQAEAISKGFAPP---SAPL 310
               ||.....|:         |.|||   |.|:
Zfish   200 ---RQDQTLEMV---------GIAPPRRISVPV 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 45/98 (46%)
Homeodomain 218..274 CDD:459649 32/55 (58%)
nkx2.5NP_571496.2 Homeodomain 142..198 CDD:459649 32/55 (58%)

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