DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and nkx2.7

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_571494.1 Gene:nkx2.7 / 30694 ZFINID:ZDB-GENE-990415-179 Length:269 Species:Danio rerio


Alignment Length:177 Identity:53/177 - (29%)
Similarity:73/177 - (41%) Gaps:61/177 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 SGEKGEEKELLQQEDHDLAYKLATSIANSTYGS----------AAALYSYPHLYPSAAGGHVLRV 167
            |.|||...|.::.:|.|        |..|:.||          ..::..:.....|:..|..||.
Zfish    61 SPEKGIPGEQVKCDDFD--------IVRSSCGSPTEEEMDANEETSMCPFTDSSYSSKNGETLRE 117

  Fly   168 PPQRTPLTWALPPLHHAALAHQAVKDRLAAAFPIARRIGHPYQNRTPPKRKKPRTSFTRIQVAEL 232
            .|                      |.||                     |:|||..|::.||.||
Zfish   118 KP----------------------KQRL---------------------RRKPRVLFSQTQVFEL 139

  Fly   233 EKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEE 279
            |:||.:|:||::.||..||..||:|..|||.||||||.|.:||..::
Zfish   140 ERRFKQQRYLSAPERDHLALALKLTSTQVKIWFQNRRYKCKRQRQDK 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 34/84 (40%)
Homeodomain 218..274 CDD:459649 31/55 (56%)
nkx2.7NP_571494.1 COG5576 87..210 CDD:227863 42/143 (29%)
Homeodomain 125..181 CDD:459649 31/55 (56%)

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