DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and dlx2a

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_571386.2 Gene:dlx2a / 30574 ZFINID:ZDB-GENE-980526-212 Length:274 Species:Danio rerio


Alignment Length:270 Identity:75/270 - (27%)
Similarity:108/270 - (40%) Gaps:82/270 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LSESLQSEQTRSSS---------SENLPFSISRLLSKPFETSHHHHNNNNHLLSSSP----GSSS 108
            ||..:.|.|..|||         |..||.|.:        |...::||||...:.||    .|..
Zfish    11 LSTDMHSNQITSSSYHSLHKSQESPTLPVSTA--------TDSSYYNNNNQQCAGSPYGQISSYQ 67

  Fly   109 NNNNSGEKGEEKELLQQEDHDLAYKLATSIANSTYGSAAALYSYPHLYPSAAGGHVLRVPPQRTP 173
            ..|||        :...:.:..:|:|....|...||:..:..|     |:.|             
Zfish    68 YQNNS--------MNSVQYNTKSYELGFGNAFGPYGTYGSCSS-----PTPA------------- 106

  Fly   174 LTWALPPLHHAALAHQAVKDRLAAAFPIARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHK 238
                           .|.|:.   :.|..|.:     |..|.|.:||||.::..|:|.|::||.|
Zfish   107 ---------------DAEKEE---SEPEIRMV-----NGKPKKVRKPRTIYSSFQLAALQRRFQK 148

  Fly   239 QKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRR-QTAEEREAERQAANRLMLSLQAEAISKG 302
            .:|||..|||.||..|.:|..|||.||||||:|::: ..:.|...|:..|:           |:.
Zfish   149 TQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKKLWKSGEIPPEQHVAS-----------SES 202

  Fly   303 FAPPSAPLGS 312
            ...||.||.:
Zfish   203 PPHPSPPLAA 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 43/118 (36%)
Homeodomain 218..274 CDD:459649 30/55 (55%)
dlx2aNP_571386.2 DLL_N 32..107 CDD:463567 23/123 (19%)
Homeodomain 128..184 CDD:459649 30/55 (55%)

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