Protein Alignment C15 and msx2b

DIOPT Version :10

• Sequence 1: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Sequence 2: NP_571351.3
• Gene: msx2b / 30531
• ZFINID: ZDB-GENE-980526-492
• Length: 241
• Species: Danio rerio
• Alignment Length: 281
• Identity: 72/281 - (25%)
• Similarity: 107/281 - (38%)
• Gaps: 90/281 - (32%)

  Fly    44 MDGGSCYDESETPLSESLQSEQTRSSSSENLPFSISRLLSKPFETSHHHHNNNNHLLSSSPGSSS 108
            |...:...||:.  ...::..:|:.||.   |||:..|:                       ||.
Zfish     1 MSASASLKESDG--DRDMEQRKTQVSSH---PFSVESLI-----------------------SSH 37

  Fly   109 NNNNSGEKGEEKELLQQEDHDLAYKLATSIANSTYGSAAALYSYPHLYPSAAGGHVLRVPPQRTP 173
            ..|...|:..|         |::.:.|.:....:.|||.                   :|
Zfish    38 KTNKDFERRRE---------DVSSQFAQTEIRDSCGSAG-------------------IP----- 69

  Fly   174 LTWALPPLHHAALAHQAVKDRL-----AAAFPIARRIGHPYQNRTPPKRK-----KPRTSFTRIQ 228
                    .|..|....||...     ..::.:..|.....|....|.||     ||||.||..|
Zfish    70 --------KHFMLQTSPVKSESPEPDDCTSWVMNSRYSQTRQESPCPLRKHKTNRKPRTPFTTSQ 126

  Fly   229 VAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQAANRLMLS 293
            :..||::|.:::||:.||||..:..|.:|:.|||.||||||.|.:|  .:|.|.|:       |.
Zfish   127 LLALERKFRQKQYLSIAERAEFSSSLTLTETQVKIWFQNRRAKAKR--LQEAELEK-------LK 182

  Fly   294 LQAE-AISKGFAPPSAPLGSQ 313
            |.|: |:...|:.| .|||:|
Zfish   183 LTAKPALHPNFSLP-LPLGTQ 202

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C15	NP_476873.2	COG5576	<196..315	CDD:227863	47/124 (38%)
		Homeodomain	218..274	CDD:459649	29/60 (48%)
msx2b	NP_571351.3	Homeodomain	116..172	CDD:459649	28/55 (51%)