DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and dbx2

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:XP_073798768.1 Gene:dbx2 / 30417 ZFINID:ZDB-GENE-000128-13 Length:199 Species:Danio rerio


Alignment Length:212 Identity:56/212 - (26%)
Similarity:75/212 - (35%) Gaps:52/212 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 HLLSSSPGSSSNNNNSGEKGEEKELLQQEDHDLAYKLATSIANSTYGSAAALYSYPHLYPSAAGG 162
            :||.|:|......|..  .|.|.....|..|..|..::|.......||...:.:.| |:..|.|.
Zfish    24 NLLRSTPVQIYRTNTG--PGSENRQHTQRIHTPAVIMSTVNLPCCSGSGPVMTTSP-LFTKAVGS 85

  Fly   163 HVLRVPPQRTPLTWALPPLHHAALAHQAVKDRLAAAFPIARRIGHPYQNRTPPKRKKP----RTS 223
                       :.|. |.::                                 .|.:|    |..
Zfish    86 -----------VLWT-PAIN---------------------------------SRSRPGILRRAV 105

  Fly   224 FTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQAAN 288
            |:..|..||||.|.||||::..||..||..|.:.:.|||.||||||.|||....:|.........
Zfish   106 FSEEQRRELEKTFSKQKYISKTERNRLASELSLKETQVKIWFQNRRMKWRNSREKEISNTHTHME 170

  Fly   289 RLMLSLQAEAISKGFAP 305
            :||...|:|.......|
Zfish   171 KLMDWSQSEPADDTHTP 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 37/114 (32%)
Homeodomain 218..274 CDD:459649 29/59 (49%)
dbx2XP_073798768.1 None

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