DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and hoxa10b

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_571230.2 Gene:hoxa10b / 30391 ZFINID:ZDB-GENE-990415-97 Length:347 Species:Danio rerio


Alignment Length:74 Identity:30/74 - (40%)
Similarity:40/74 - (54%) Gaps:0/74 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 TPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTA 277
            |....:|.|..:|:.|..||||.|....||....|..::|.:.:||.|||.||||||.|.::.:.
Zfish   269 TAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMSR 333

  Fly   278 EEREAERQA 286
            |.|..|..|
Zfish   334 ENRIRELSA 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 30/74 (41%)
Homeodomain 218..274 CDD:459649 25/55 (45%)
hoxa10bNP_571230.2 Homeodomain 274..330 CDD:459649 25/55 (45%)

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