Protein Alignment C15 and hoxd9a

DIOPT Version :10

• Sequence 1: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Sequence 2: NP_571201.3
• Gene: hoxd9a / 30350
• ZFINID: ZDB-GENE-990415-121
• Length: 262
• Species: Danio rerio
• Alignment Length: 298
• Identity: 75/298 - (25%)
• Similarity: 106/298 - (35%)
• Gaps: 68/298 - (22%)

  Fly     1 MSSHEED---DHEHENEHGEEVEEQEIHVDVDSDSRMSCGSGSDVDMDGGSCYDESETPLS---- 58
            :||:..|   .||.|:.:|....:       .|.:..:..||...:.|..||   |..|.|
Zfish     7 LSSYYVDTIMGHEAEDVYGARYIQ-------GSHTAPARPSGVVENADFSSC---SFAPKSAVFP 61

  Fly    59 ---ESLQSEQTRSSSSENLPFSISRLLSKPFETSHHHHNNN----------NHLLSSSPGSSSNN 110
               .|:....|.:.|.          :..|:....|..:|.          ||:  |..|...|:
Zfish    62 ASWSSVHQPSTAAVSG----------IYHPYVHQTHLSDNRYVRSWIEPVANHI--SLTGFHPNS 114

  Fly   111 NNSGEKGEEKELLQQEDHDLAYKLATSIANSTYGSAAALYSYPHLYPSAAGGHVLRVPPQRTPLT 175
            .:||.|.|          .|..|...|.|..|...:...:|...:..||......||....:
Zfish   115 RHSGTKTE----------SLPPKRTESAAFETETPSVPEFSLNAVSESADKATEERVGSDNS--- 166

  Fly   176 WALPPLHHAALAHQAVKDRLAAAFPIARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQK 240
                  .|.....:..:.:|..:.|.|..| |....|      |.|..:|:.|..||||.|....
Zfish   167 ------SHGEPKDEKQQQQLDPSNPAANWI-HARSTR------KKRCPYTKYQTLELEKEFLYNM 218

  Fly   241 YLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAE 278
            ||....|..:||.|.:|:.|||.||||||.|.::...|
Zfish   219 YLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMNRE 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C15	NP_476873.2	COG5576	<196..315	CDD:227863	32/83 (39%)
		Homeodomain	218..274	CDD:459649	26/55 (47%)
hoxd9a	NP_571201.3	Hox9_act	1..182	CDD:461369	43/215 (20%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	107..187		19/98 (19%)
		Homeodomain	196..252	CDD:459649	27/61 (44%)