Protein Alignment C15 and hoxc4a

DIOPT Version :10

• Sequence 1: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Sequence 2: NP_571197.1
• Gene: hoxc4a / 30345
• ZFINID: ZDB-GENE-990415-112
• Length: 268
• Species: Danio rerio
• Alignment Length: 241
• Identity: 67/241 - (27%)
• Similarity: 98/241 - (40%)
• Gaps: 51/241 - (21%)

  Fly    93 HNNNNHLLSSSPGSSSNNNNSGEKGEEKELLQQEDHDLAYKLATSIANSTYGSAAALYSYP---- 153
            ::.|:::...||...|...:||         .|..|...|....|.....|..|    |.|
Zfish    23 YSQNSYIPEHSPEYYSRARDSG---------YQHHHQELYPPRASYQERQYNCA----SIPEPDT 74

  Fly   154 ---HLYPSAAGGHVL------RVPPQRTPLTWALPPLHHAALAHQAVKDRLAAAFPIARRIGHPY 209
               |..|.|  ||:|      ...|...||:.|.|....:| .:||..:...::....:.:.:|:
Zfish    75 QRGHGLPHA--GHLLGKGQSASCEPPPLPLSPATPSAASSA-CNQATPEHPNSSASAKQPVVYPW 136

  Fly   210 Q------------NRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVK 262
            .            |...|||.  ||::||.||.||||.||..:||....|..:|..|.:::.|:|
Zfish   137 MKKIHVSTVNSSYNGAEPKRS--RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIK 199

  Fly   263 TWFQNRRTKWRRQTAEEREAERQAANRLMLSLQAEAISKGFAPPSA 308
            .||||||.||::        :.:..|..:.|..:..||.|....||
Zfish   200 IWFQNRRMKWKK--------DHRLPNTKVRSSSSTGISSGSNTSSA 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C15	NP_476873.2	COG5576	<196..315	CDD:227863	39/125 (31%)
		Homeodomain	218..274	CDD:459649	27/55 (49%)
hoxc4a	NP_571197.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	70..129		15/61 (25%)
		Antp-type hexapeptide	133..138		1/4 (25%)
		Homeodomain	155..211	CDD:459649	29/57 (51%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	212..268		7/26 (27%)