DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and hoxb4a

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_571193.1 Gene:hoxb4a / 30340 ZFINID:ZDB-GENE-990415-105 Length:246 Species:Danio rerio


Alignment Length:262 Identity:70/262 - (26%)
Similarity:102/262 - (38%) Gaps:75/262 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 HNNNNHLLSSSPGSSSNNNNSGEKGEEKELLQQED----HDLAYKLATSIANSTY------GSAA 147
            ::.:::|.|.||...|              .|::|    |:..|...:..|:..|      |..|
Zfish    23 YSQSDYLPSHSPDYYS--------------AQRQDPSFQHESIYHQRSGCADPPYSSCQGPGQPA 73

  Fly   148 ALYSYPHLYPSAAGGHVLRVPPQRTPLTWALPPLHH----------------AALAHQAVKDRL- 195
            |:.| |.       ||||......|||.   .|.||                .:.....|..|. 
Zfish    74 AVIS-PR-------GHVLPTTALSTPLP---EPSHHCDSVTPSPPPACGQTPTSQNTSTVSSRKD 127

  Fly   196 AAAFPIARRIGH-----PYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLK 255
            ...:|..::: |     |..:...|||.  ||::||.||.||||.||..:||....|..:|..|.
Zfish   128 PVVYPWMKKV-HVNIVSPNYSGGEPKRS--RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLC 189

  Fly   256 MTDAQVKTWFQNRRTKWRRQTAEEREAERQAANRLMLSLQAEAISKGFAPPSAP--LGSQGGVNG 318
            :::.|:|.||||||.||::        :.:..|..:.|..|...|.|     .|  ..:|...:|
Zfish   190 LSERQIKIWFQNRRMKWKK--------DHKLPNTKIRSNSASTNSSG-----CPTLCSNQSRASG 241

  Fly   319 AP 320
            .|
Zfish   242 PP 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 40/125 (32%)
Homeodomain 218..274 CDD:459649 27/55 (49%)
hoxb4aNP_571193.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..125 27/126 (21%)
Antp-type hexapeptide 130..135 1/4 (25%)
Homeodomain 152..208 CDD:459649 29/57 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 210..246 9/39 (23%)

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