DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and hoxb2a

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_571191.1 Gene:hoxb2a / 30338 ZFINID:ZDB-GENE-990415-103 Length:390 Species:Danio rerio


Alignment Length:244 Identity:68/244 - (27%)
Similarity:93/244 - (38%) Gaps:77/244 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 TSIANSTYGSAAALYSYPHLYP-------------SAAGGHVLRVPPQRTPLTWALPPLHH---- 183
            :||.:||.......::.|.|.|             :|:.|..||        |...||..|    
Zfish    35 SSIKDSTAIPPPFEHTIPSLSPCTGNQARPRSQKRTASNGLQLR--------TQTAPPTQHQQGP 91

  Fly   184 ------AALAHQA--VKDR--------------LAAAFPIARRIGHPYQNRTPPKR--------- 217
                  |.|||:.  :|::              .|||.|.....|:.......|..         
Zfish    92 APLSGGAPLAHEFPWMKEKKSSKKCPKPGATAAAAAASPSQASSGYTTAGLESPTEIQGGLDNVS 156

  Fly   218 --KKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEER 280
              ::.||::|..|:.||||.||..|||....|..:|..|.:|:.|||.||||||.|.:|||...|
Zfish   157 GSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTTHHR 221

  Fly   281 EAERQAANRLMLSLQAEAISKGF-----APPSAPLGSQG-GVNGAPLAA 323
            :.:             |....||     ...|:|..||. .|:|:..||
Zfish   222 DGQ-------------EGEPSGFDLLEGTDASSPYSSQSLEVSGSGSAA 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 44/135 (33%)
Homeodomain 218..274 CDD:459649 27/55 (49%)
hoxb2aNP_571191.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..73 6/32 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..100 4/18 (22%)
Antp-type hexapeptide 103..108 0/4 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..155 7/46 (15%)
Homeodomain 159..215 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 211..338 16/60 (27%)
PRK11907 237..>320 CDD:237019 8/21 (38%)

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