Protein Alignment C15 and Nkx1-1

DIOPT Version :10

• Sequence 1: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Sequence 2: XP_234082.6
• Gene: Nkx1-1 / 298981
• RGDID: 1564874
• Length: 443
• Species: Rattus norvegicus
• Alignment Length: 285
• Identity: 76/285 - (26%)
• Similarity: 99/285 - (34%)
• Gaps: 99/285 - (34%)

  Fly   101 SSSPGSSSNNNNSGEKGEEKELLQQEDHDLAYKL-------------------------ATSIAN 140
            ||..|.|...::..|..||     .||.|.|.::                         |..:..
  Rat   174 SSGSGRSPTADSEDEAPEE-----DEDEDQAPEVQDVQGTEEPRGGSGGLGARGSGCSGAAEVEA 233

  Fly   141 STYGSAAALYSYPHLYPSAAGGHVLRVPPQRTPLTWALPPLHHAALAHQAVKDRLAAAFPIARRI 205
            |....|||        |...|.......|   |:|.|     .|..|....:....|..|..:|.
  Rat   234 SPVDEAAA--------PGPRGNSPGAPGP---PVTAA-----GAGNAGSTPQGAAVATKPKRKRT 282

  Fly   206 GHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRT 270
            |...::..|   ::.||:||..|:..||.:|...:||:..||..||..|.:|:.|||.|||||||
  Rat   283 GSDSKSGKP---RRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRT 344

  Fly   271 KWRRQTAEEREAERQAANRLMLSLQAEAISKGFAPPSAPLGSQGGVN------------------ 317
            ||::|...                         |..|||.|..||..
  Rat   345 KWKKQNPG-------------------------ADTSAPTGGGGGPGPGAGPGAGLPGGLSPLSP 384

  Fly   318 ----GAPLAALHGLQPWAEASHAAG 338
                |||| ||||  |....:|:.|
  Rat   385 SPPMGAPL-ALHG--PAGYPAHSPG 406

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C15	NP_476873.2	COG5576	<196..315	CDD:227863	39/118 (33%)
		Homeodomain	218..274	CDD:459649	28/55 (51%)
Nkx1-1	XP_234082.6	Homeodomain	292..348	CDD:459649	28/55 (51%)