DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and GBX1

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001092304.1 Gene:GBX1 / 2636 HGNCID:4185 Length:363 Species:Homo sapiens


Alignment Length:109 Identity:42/109 - (38%)
Similarity:58/109 - (53%) Gaps:16/109 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 TPP--KRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQ 275
            |.|  |.::.||:||..|:.||||.||.:|||:..||:.:|..||:::.|||.||||||.||:|.
Human   255 TAPGGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRI 319

  Fly   276 TA---EEREAERQA-----------ANRLMLSLQAEAISKGFAP 305
            .|   ..|..|...           .||..:..|.:.:.:|..|
Human   320 KAGNVSSRSGEPVRNPKIVVPIPVHVNRFAVRSQHQQMEQGARP 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 42/109 (39%)
Homeodomain 218..274 CDD:459649 30/55 (55%)
GBX1NP_001092304.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 128..265 3/9 (33%)
Homeodomain 262..318 CDD:459649 30/55 (55%)
Blue background indicates that the domain is not in the aligned region.

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