Protein Alignment C15 and Gbx1

DIOPT Version :10

• Sequence 1: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Sequence 2: NP_001258382.1
• Gene: Gbx1 / 246149
• RGDID: 621864
• Length: 425
• Species: Rattus norvegicus
• Alignment Length: 122
• Identity: 44/122 - (36%)
• Similarity: 62/122 - (50%)
• Gaps: 23/122 - (18%)

  Fly   200 PIARRIGHPYQNRTPP--KRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVK 262
            |:|..:       |.|  |.::.||:||..|:.||||.||.:|||:..||:.:|..||:::.|||
  Rat   311 PVATGV-------TTPGGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVK 368

  Fly   263 TWFQNRRTKWRRQTA---EEREAERQA-----------ANRLMLSLQAEAISKGFAP 305
            .||||||.||:|..|   ..|..|...           .||..:..|.:.:.:|..|
  Rat   369 IWFQNRRAKWKRIKAGNVSSRSGEPVRNPKIVVPIPVHVNRFAVRSQHQQMEQGARP 425

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C15	NP_476873.2	COG5576	<196..315	CDD:227863	44/122 (36%)
		Homeodomain	218..274	CDD:459649	30/55 (55%)
Gbx1	NP_001258382.1	Homeodomain	324..380	CDD:459649	30/55 (55%)