DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment C15 and Vax1

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_033527.1 Gene:Vax1 / 22326 MGIID:1277163 Length:338 Species:Mus musculus


Alignment Length:128 Identity:47/128 - (36%)
Similarity:64/128 - (50%) Gaps:11/128 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 KKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEERE- 281
            |:.|||||..|:..||..|.:.:|:...||..|||.|.:::.|||.||||||||.::...::.| 
Mouse   101 KRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQGKDSEL 165

  Fly   282 ---AERQAANRLMLSLQAEAISKG--FAPPSAPLGSQGGVNGAPLAALHGLQ-PWAEASHAAG 338
               ....||...:|.|    :.:|  .:||..|........||..:||.|.. |...|..|||
Mouse   166 RSVVSETAATCSVLRL----LEQGRLLSPPGLPALLPPCATGALGSALRGPSLPALGAGAAAG 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 37/102 (36%)
Homeodomain 218..274 CDD:459649 28/55 (51%)
Vax1NP_033527.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..69
Homeodomain 101..157 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 239..269
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..338
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.