DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and Nkx1-2

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_033149.1 Gene:Nkx1-2 / 20231 MGIID:104806 Length:305 Species:Mus musculus


Alignment Length:229 Identity:44/229 - (19%)
Similarity:69/229 - (30%) Gaps:97/229 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly  1345 THYPAAHGTAAKLRQPVGPGQHGVGKPAPIYITSYLNTIHIRQRNANGTGIRLNATVRLQE---- 1405
            ||:||..  |||:                  ...||||.|       |:..|:....::.:    
Mouse    20 THFPARR--AAKV------------------AVHYLNTRH-------GSPFRVFGLQQVHKATAE 57

  Fly  1406 --DAGYKMKLISNTDEWVESCRPNPCQYGGKCISAGPGHRRGICQCYGHFTGRFCGLNICELEPC 1468
              |||.|..|..:..||..|                    :.:.:|..               ..
Mouse    58 DVDAGRKYSLDFSVTEWARS--------------------KSVFRCSA---------------VV 87

  Fly  1469 FFGKCELTPTSFKCNCQPGFVGVRCDQRQKPCADNPCESRGECFEKNGGFFCRCHAWWEGARCEK 1533
            .|...:.||...:..|:        |.:|  ....|.|.         .|:.|    :..:....
Mouse    88 LFSTAQKTPPDVQLQCE--------DLQQ--INTTPQEE---------AFYHR----YSTSDSPV 129

  Fly  1534 RMMHIP--YKPLSERMLQEPFW--LGLITVFVVL 1563
            ..:.||  :..:|:.|  ||||  .|:...|::|
Mouse   130 SALDIPDSHGNMSQEM--EPFWHLAGVSASFIML 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863
Homeodomain 218..274 CDD:459649
Nkx1-2NP_033149.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..158 28/166 (17%)
Homeodomain 157..213 CDD:459649 2/5 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 210..257
Blue background indicates that the domain is not in the aligned region.

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