DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and Nkx3-1

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_035051.1 Gene:Nkx3-1 / 18095 MGIID:97352 Length:237 Species:Mus musculus


Alignment Length:140 Identity:50/140 - (35%)
Similarity:66/140 - (47%) Gaps:36/140 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 PSAAGGH--------VLRVPPQRTPL---------TWALPPLHHAALAHQAVKDRLAAAFPIARR 204
            |..|||.        .:|..|..||.         |:.|...|:..        .||:|      
Mouse    67 PDKAGGRGVAPEDPPSIRHSPAETPTEPESDAHFETYLLDCEHNPG--------DLASA------ 117

  Fly   205 IGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRR 269
               |...:.|.||.  |.:|:..||.|||::|..||||::.|||.||:.||:|:.|||.||||||
Mouse   118 ---PQVTKQPQKRS--RAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRR 177

  Fly   270 TKWRRQTAEE 279
            .|.:|:...|
Mouse   178 YKTKRKQLSE 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 38/84 (45%)
Homeodomain 218..274 CDD:459649 30/55 (55%)
Nkx3-1NP_035051.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..96 8/28 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..130 8/40 (20%)
Homeodomain 126..182 CDD:459649 32/57 (56%)

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