DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and Nkx2-5

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_032726.1 Gene:Nkx2-5 / 18091 MGIID:97350 Length:318 Species:Mus musculus


Alignment Length:318 Identity:86/318 - (27%)
Similarity:122/318 - (38%) Gaps:121/318 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 KELLQQEDH-------DLAYKLATSIANSTYGSAA---ALYSYPHLYPSAAGGHVLRV------- 167
            |::|..|..       ||:.:|..::|.::...||   ..||.|.  .:|:|...||.       
Mouse    15 KDILNLEQQQRSLASGDLSARLEATLAPASCMLAAFKPEAYSGPE--AAASGLAELRAEMGPAPS 77

  Fly   168 PPQRTPLTWALPPLHHAALAH-------QAVKDRL---------------AAAFPIARRIGHPYQ 210
            ||:.:|...|.|..:..|...       :|.|..|               .|..|.|||      
Mouse    78 PPKCSPAFPAAPTFYPGAYGDPDPAKDPRADKKELCALQKAVELDKAETDGAERPRARR------ 136

  Fly   211 NRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQ 275
                  |:|||..|::.||.|||:||.:|:||::.||..||..||:|..|||.||||||.|.:||
Mouse   137 ------RRKPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQ 195

  Fly   276 TAEER---------EAERQAANRLM------------------LSLQA-------------EAIS 300
            ..::.         .|.|.|...|:                  :.|.|             .|.|
Mouse   196 RQDQTLELLGPPPPPARRIAVPVLVRDGKPCLGDPAAYAPAYGVGLNAYGYNAYPYPSYGGAACS 260

  Fly   301 KGF---APPSAPLGSQ---------------GGVN-----GAP-----LAALHGLQPW 330
            .|:   |.|:||..:|               |.:|     |.|     ::.|||::.|
Mouse   261 PGYSCAAYPAAPPAAQPPAASANSNFVNFGVGDLNTVQSPGMPQGNSGVSTLHGIRAW 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 53/176 (30%)
Homeodomain 218..274 CDD:459649 31/55 (56%)
Nkx2-5NP_032726.1 Homeodomain 144..194 CDD:459649 28/49 (57%)

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