DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and Nkx2-3

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_032725.1 Gene:Nkx2-3 / 18089 MGIID:97348 Length:362 Species:Mus musculus


Alignment Length:335 Identity:82/335 - (24%)
Similarity:126/335 - (37%) Gaps:102/335 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 PFSISRLLSKPFETSHHHHNNNNHL-------LSSSPG--SSSNNNNSGEKGEEKELLQQEDHDL 130
            |||:..:|:  .|...|.|  ..||       ..|:|.  :::......:.|||.|  ::|...|
Mouse    11 PFSVKDILN--LEQQRHFH--GAHLQAELEQHFHSAPCMLATAEGTQFSDAGEEDE--EEEGEKL 69

  Fly   131 AYKLATSIANSTYGSAAALYSYPH-LYPSAAGGHVLRVPPQRTPLTWALPPLHHAALAHQAVKDR 194
            :|..:.:.|.....|.....||.| :...|..|     |.::               ..:.|.:|
Mouse    70 SYLNSLAAAEGHGDSGLCPQSYVHTVLRDACSG-----PKEQ---------------EEEVVSER 114

  Fly   195 LAAAFPIARRIGHPYQNRT--------PPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALA 251
            ...:..:.:.:......:|        |..|:|||..|::.||.|||:||.:|:||::.||..||
Mouse   115 SQKSCQLKKSLEAAGDCKTSEDGERPKPRSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLA 179

  Fly   252 RGLKMTDAQVKTWFQNRRTKWRRQTAEEREAE----------RQAANRLML-------------- 292
            ..||:|..|||.||||||.|.:|| .:::..|          |:.|..:::              
Mouse   180 SSLKLTSTQVKIWFQNRRYKCKRQ-RQDKSLELGTHAPPPPPRRVAVPVLVRDGKPCVTPSAQTY 243

  Fly   293 -----------------------SLQAEAISKGFAPPSA----------PLGSQGGVNGAPLAAL 324
                                   |..|.|.:...|..:|          |.|..||..|...||.
Mouse   244 GSPYGVGAGAYSYNSFPAYGYGNSAAAAAAAAAAAAAAAAYSGSYGCAYPTGGGGGGGGTASAAT 308

  Fly   325 HGLQPWAEAS 334
            ..:||...|:
Mouse   309 TAMQPACSAT 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 46/183 (25%)
Homeodomain 218..274 CDD:459649 31/55 (56%)
Nkx2-3NP_032725.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 126..149 4/22 (18%)
Homeodomain 146..202 CDD:459649 31/55 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..222 2/19 (11%)

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