DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and ceh-13

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_498655.1 Gene:ceh-13 / 176069 WormBaseID:WBGene00000437 Length:202 Species:Caenorhabditis elegans


Alignment Length:252 Identity:61/252 - (24%)
Similarity:85/252 - (33%) Gaps:92/252 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 MDGGSCYDESETPLSESLQSEQTRSSSSENLPFSISRLLSKPFETSHHHHNN----NNHL----- 99
            |....||.   .|.....|...|..|...::|.|.|.|...|.:....|.:|    |.|:     
 Worm     1 MSSTECYG---APPHNYYQDWPTTHSYYPSVPSSYSPLNHHPADIWAAHPSNYIMGNGHVSPPAT 62

  Fly   100 -LSSSPGSSSNNNNSGEKGEEKELLQQEDHDLAYKLATSIANSTYGSAAALYSYPHLYPSAAGGH 163
             ...||.:|.::|:|.|                  |.|.:..|.:.:    |.:.|...|     
 Worm    63 ASGLSPPASRSSNSSAE------------------LPTGVTASQHNT----YKWMHTKRS----- 100

  Fly   164 VLRVPPQRTPLTWALPPLHHAALAHQAVKDRLAAAFPIARRIGHPYQNRTPPKRK------KPRT 222
                                                          |....||:|      ..||
 Worm   101 ----------------------------------------------QRPAAPKKKVIDENGTNRT 119

  Fly   223 SFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEE 279
            :||..|:.||||.||..||:....|..:|..||:.:||||.||||||.|.:::..|:
 Worm   120 NFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQVKIWFQNRRMKEKKREKEK 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 33/90 (37%)
Homeodomain 218..274 CDD:459649 29/61 (48%)
ceh-13NP_498655.1 Homeodomain 118..164 CDD:459649 23/45 (51%)

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